Data quality metrics extracted from 6sr9.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6SR9 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE BM30A
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BM30A
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2018-05-07
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97992
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless (0.5.17)
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (1.10.1_2155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
68.516 142.624 65.431 90.00 116.44 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97992 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
45.270 45.270 1.880
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.845 9.040 1.845
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.071 0.052 0.539
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.078 0.059 0.602
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.033 0.026 0.264
Total number of observations
_reflns_shell.number_measured_all
- 1834 13396
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
47917 384 2817
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
11.80 25.90 2.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.4 90.6 95.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.9 4.8 4.8
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.997 0.984 0.910

Refinement
PDB entry ID
_entry.id
6SR9
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-09-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
37.6 - 1.845 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2029 / 0.2417
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6SR8