Data quality metrics extracted from 8sc9.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8SC9 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X06SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X06SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2023-02-17
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.000032
Software
Data reduction
_software.classification
XDS (Jan 10, 2022)
Data scaling #1
_software.classification
Aimless (0.7.9)
Data scaling #2
_software.classification
STARANISO (2.3.87)
Phasing
_software.classification
BUSTER (2.11.8 (8-JUN-2022))
Refinement
_software.classification
BUSTER (2.11.8 (8-JUN-2022))
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
93.205 61.383 118.741 90.00 102.52 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00003 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
33.218 2.172
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.855 1.855
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.058 0.907
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.063 0.982
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.024 0.373
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
35249 3526
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.40 2.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
63.4 17.0
Multiplicity
_reflns.pdbx_redundancy
6.8 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.813

Refinement
PDB entry ID
_entry.id
8SC9
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-04-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
33.2 - 1.855 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2116 / 0.2411
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS