Data quality metrics extracted from 7s3z.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7S3Z at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL9-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL9-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2018-06-08
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9795
Software
Data reduction
_software.classification
MOSFLM
Data scaling #1
_software.classification
Aimless (0.7.1)
Data scaling #2
_software.classification
Aimless
Refinement
_software.classification
PHENIX (1.11.1-2575_1496)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
52.173 111.893 164.775 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97950 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
39.194 39.190 1.760
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.730 9.470 1.730
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.068 0.018 2.970
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.076 0.020 3.398
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.032 0.008 1.605
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
184039 730 4817
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
13.00 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 98.8 96.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.8 5.5 4.0
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.860 1.000 0.425

Refinement
PDB entry ID
_entry.id
7S3Z
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-09-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.2 - 1.730 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1956 / 0.2352
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS
Starting model
_refine.pdbx_starting_model
1OM4