Data quality metrics extracted from 6rxj.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6RXJ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X10SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X10SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-11-24
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.00000
Software
Data reduction
_software.classification
XDS (VERSION JAN 31, 2018)
Data scaling
_software.classification
XSCALE (VERSION JAN 31, 2018)
Phasing
_software.classification
PHASER (2.5.6)
Refinement
_software.classification
PHENIX (1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
131.10 131.26 58.54 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.379 46.379 1.640
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.600 7.160 1.600
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.068 0.033 1.618
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.070 0.035 1.682
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs
868617 10097 63756
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
66812 839 4841
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
18.83 57.82 1.60
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 99.5 99.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
13.0 12.0 13.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.999 0.644

Refinement
PDB entry ID
_entry.id
6RXJ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-06-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.4 - 1.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1731 / 0.1876
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1S5P