Data quality metrics extracted from 7rvm.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7RVM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-007 HF
Temperature [K]
_diffrn.ambient_temp
120
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2020-11-06
Detector
_diffrn_detector.type
RIGAKU
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54180
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.18.2_3874)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
51.980 81.350 89.634 90.00 96.11 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.930 2.000
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.950 1.950
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
26421 1866
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.30 -
Completeness [%]
_reflns.percent_possible_obs
97.4 -
Multiplicity
_reflns.pdbx_redundancy
6.9 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.996 0.865

Refinement
PDB entry ID
_entry.id
7RVM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-08-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.9 - 1.950 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2055 / 0.2383
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
7