Data quality metrics extracted from 7rvc.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.

Experimental information for 7RVC at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
ELECTRON CRYSTALLOGRAPHY
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ELECTRON MICROSCOPE
Source details
_diffrn_source.type
OTHER
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CMOS
Collection date
_diffrn_detector.pdbx_collection_date
2016-11-13
Detector
_diffrn_detector.type
TVIPS TEMCAM-F416
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.0251
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
SHELXD
Refinement
_software.classification
PHENIX (1.12_2829)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
10.02 4.89 31.33 90.99 91.42 102.18
Wavelength
_diffrn_radiation_wavelength.wavelength
0.02510 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å] 
_reflns.d_resolution_low _reflns_shell.d_res_low
 10.437 10.000 1.030
High resolution limit [Å] 
_reflns.d_resolution_high _reflns_shell.d_res_high
 1.000 4.480 1.000
Rmerge 
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
 0.187 0.103 0.432
Rmeas 
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
 0.207 0.114 0.492
  Rpim - - -
Total number of observations 
_reflns.pdbx_number_measured_all
 15771 - -
Total number unique 
_reflns.number_obs _reflns_shell.number_unique_obs
 3031 30 167
<I/σ(I)> 
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
 5.56 10.16 2.11
Completeness [%] 
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
 97.6 85.7 77.0
Multiplicity 
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
 5.2 5.2 4.1
CC(1/2) 
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
 0.988 0.990 0.840

Refinement
PDB entry ID
_entry.id
7RVC
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-08-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
10.4 - 1.002 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1627 / 0.1675
Structure solution method
_refine.pdbx_method_to_determine_struct
AB INITIO PHASING