Data quality metrics extracted from 4rnf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4RNF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-07-27
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Software
Data reduction
_software.classification
xia2
Data scaling
_software.classification
Aimless (0.1.27; 11/07/12; Phil Evans)
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (1.8_1069; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
40.744 47.352 60.010 82.15 71.63 70.66
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97623 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
28.460
High resolution limit [Å]
_reflns.d_resolution_high
2.850
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.174
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
9235
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.40
Completeness [%]
_reflns.percent_possible_obs
98.5
Multiplicity
_reflns.pdbx_redundancy
2.8
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4RNF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-10-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
28.5 - 2.850 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2390 / 0.2780
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given