Data quality metrics extracted from 9rjl.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9RJL at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALBA BEAMLINE XALOC
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALBA
Beamline
_diffrn_source.pdbx_synchrotron_beamline
XALOC
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2024-09-22
Detector
_diffrn_detector.type
DECTRIS PILATUS3 X 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979260
Software
Data processing #1
_software.classification
autoPROC (1.0.5 20230726)
Data processing #2
_software.classification
TRUNCATE (9.0.003)
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHASER
Model building
_software.classification
Coot
Refinement
_software.classification
BUSTER (2.10.4)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
99.80 82.35 187.76 90.00 95.67 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97926 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
63.392 63.392 1.728
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.699 4.611 1.699
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.075 0.051 0.573
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.090 0.061 0.685
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.049 0.033 0.371
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
511851 27345 22826
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
160107 8367 7452
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.65 19.87 2.17
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.2 98.2 90.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.2 3.3 3.1
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.996 0.994 0.643
Anomalous completeness
_reflns.pdbx_percent_possible_anomalous _reflns_shell.pdbx_percent_possible_anomalous
83.8 95.7 70.9
Anomalous multiplicity
_reflns.pdbx_redundancy_anomalous _reflns_shell.pdbx_redundancy_anomalous
1.7 1.7 1.8
CC(ano)
_reflns.pdbx_CC_half_anomalous _reflns_shell.pdbx_CC_half_anomalous
-0.134 -0.265 -0.041
|DANO|/σ(DANO)
_reflns.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous
0.794 0.681 0.748

Refinement
PDB entry ID
_entry.id
9RJL
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2025-06-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
63.4 - 1.699 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1937 / 0.2161
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS