Data quality metrics extracted from 9rjj.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9RJJ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SOLEIL BEAMLINE PROXIMA 1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SOLEIL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
PROXIMA 1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2024-09-12
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97856
Software
Data processing #1
_software.classification
autoPROC (1.0.5 20230726)
Data processing #2
_software.classification
TRUNCATE (9.0.004)
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHASER
Model building
_software.classification
Coot
Refinement
_software.classification
BUSTER (2.10.4)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
99.92 82.54 187.99 90.00 95.79 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97856 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
187.030 187.030 2.116
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.080 5.647 2.080
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.171 0.051 1.226
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.184 0.056 1.320
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.069 0.021 0.486
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
616955 31991 32532
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
87988 4720 4503
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
8.92 26.61 1.66
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.3 99.8 99.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.0 6.8 7.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.996 0.998 0.643
Anomalous completeness
_reflns.pdbx_percent_possible_anomalous _reflns_shell.pdbx_percent_possible_anomalous
95.8 99.9 99.8
Anomalous multiplicity
_reflns.pdbx_redundancy_anomalous _reflns_shell.pdbx_redundancy_anomalous
3.6 3.6 3.6
CC(ano)
_reflns.pdbx_CC_half_anomalous _reflns_shell.pdbx_CC_half_anomalous
-0.021 -0.096 -0.012
|DANO|/σ(DANO)
_reflns.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous
0.800 0.752 0.753

Refinement
PDB entry ID
_entry.id
9RJJ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2025-06-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
30.1 - 2.080 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1853 / 0.2180
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS