Data quality metrics extracted from 6rgb.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6RGB at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID14-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID14-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-06-09
Detector
_diffrn_detector.type
ADSC QUANTUM 210
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.933400
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
Aimless (0.7.2)
Phasing
_software.classification
PHENIX
Refinement #1
_software.classification
PHENIX (1.14_3260)
Refinement #2
_software.classification
PHENIX (1.14_3260)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 2 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
62.79 75.62 118.11 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.93340 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
37.810 37.810 2.320
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.250 8.980 2.250
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.074 0.029 0.480
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.082 0.033 0.548
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.034 0.014 0.254
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
74351 1130 5984
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
13690 245 1212
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
16.40 41.10 3.50
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.5 97.3 97.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.4 4.6 4.9
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.996 0.999 0.790

Refinement
PDB entry ID
_entry.id
6RGB
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-04-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
37.4 - 2.250 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2062 / 0.2306
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given