Data quality metrics extracted from 4rdq.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4RDQ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS BEAMLINE X25
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X25
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-04-19
Detector
_diffrn_detector.type
PSI PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.1
Software
Data collection
_software.classification
CBASS
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
SHARP
Refinement #1
_software.classification
PHENIX (phenix.refine: 1.9_1678)
Refinement #2
_software.classification
CNS (1.3)
Refinement #3
_software.classification
REFMAC
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
98.540 242.904 172.757 90.00 93.68 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.10000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
40.000 2.950
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.850 2.850
Rmerge
_reflns.pdbx_Rsym_value
0.113 -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
188162 18682
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.20 1.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.8 6.7
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
4RDQ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-09-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.9 - 2.850 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2167 / 0.2341
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD