Data quality metrics extracted from 7rcm.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.

Experimental information for 7RCM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL7-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL7-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-11-21
Detector
_diffrn_detector.type
ADSC QUANTUM 1
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.1533
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless (0.7.4)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0258)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
128.793 128.793 240.652 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.15330 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å] 
_reflns.d_resolution_low _reflns_shell.d_res_low
 39.820 39.760 2.150
High resolution limit [Å] 
_reflns.d_resolution_high _reflns_shell.d_res_high
 2.100 9.840 2.100
Rmerge 
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
 0.218 0.064 1.136
Rmeas 
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
 0.223 0.065 1.254
Rpim 
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
 0.046 0.011 0.515
Total number of observations 
_reflns_shell.number_measured_all
 - 25394 22383
Total number unique 
_reflns.number_obs _reflns_shell.number_unique_obs
 68728 810 4199
<I/σ(I)> 
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
 9.40 25.40 1.20
Completeness [%] 
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
 99.3 98.6 92.0
Multiplicity 
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
 16.7 31.4 5.3
CC(1/2) 
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
 0.997 0.999 0.568

Refinement
PDB entry ID
_entry.id
7RCM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-07-07
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.8 - 2.100 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1957 / 0.2356
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1WUU