Data quality metrics extracted from 3r8e.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3R8E at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL14-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL14-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2010-05-26
Detector
_diffrn_detector.type
MARMOSAIC 325 mm CCD
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA (3.3.15; Phil Evans; pre@mrc-lmb.cam.ac.uk)
Phasing
_software.classification
SOLVE (Tom Terwilliger; terwilliger@LANL.gov)
Model building #1
_software.classification
MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu)
Model building #2
_software.classification
Xpleo (0.9.0.2; 08/2010; Henry van den Bedem; vdbedem@slac.stanford.edu)
Refinement #1
_software.classification
BUSTER-TNT (2.8.0; Gerard Bricogne; buster-develop@GlobalPhasing.com)
Refinement #2
_software.classification
BUSTER (2.8.0)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
71.827 78.359 65.744 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97919 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.890 29.891 1.690
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.650 7.380 1.650
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.099 0.066 0.754
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.111 0.076 0.850
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.050 0.036 0.387
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
219449 2335 14552
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
45238 570 3175
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
7.90 10.20 1.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 97.0 96.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.9 4.1 4.6
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3R8E
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-03-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.9 - 1.650 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2137 / 0.2346
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD