Data quality metrics extracted from 6r6d.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6R6D at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-02-18
Detector
_diffrn_detector.type
DECTRIS PILATUS3 S 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9763
Software
Data reduction
_software.classification
xia2
Data scaling #1
_software.classification
Aimless
Data scaling #2
_software.classification
xia2
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.15rc2_3433: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
46.704 46.704 34.308 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97630 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
34.310 1.870
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.838 1.840
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.097 -
Rmeas
_reflns.pdbx_Rrim_I_all
0.100 -
Rpim
_reflns.pdbx_Rpim_I_all
0.021 -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
6316 180
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
17.70 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 98.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
23.5 24.5
CC(1/2)
_reflns.pdbx_CC_half
0.999 -

Refinement
PDB entry ID
_entry.id
6R6D
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-03-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
33.0 - 1.838 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1786 / 0.1866
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD