Data quality metrics extracted from 5r43.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5R43 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 23-ID-B
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
23-ID-B
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-04-13
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9
Software
Data reduction
_software.classification
HKL-2000 (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing
_software.classification
PHENIX
Refinement
_software.classification
REFMAC (5.8.0158; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 42 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
68.859 68.859 96.489 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.90000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.040
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.000 2.150 1.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.070 0.047 0.465
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
1906448 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
118425 13142 7353
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
18.80 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.5 99.8 59.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
16.1 18.1 2.5
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5R43
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-02-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
56.0 - 1.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1147 / 0.1319
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS
Starting model
_refine.pdbx_starting_model
1GCT