Data quality metrics extracted from 9r0y.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9R0Y at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2024-06-28
Detector
_diffrn_detector.type
DECTRIS EIGER2 XE 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9405
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
DIALS
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.20.1_4487)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
68.383 73.350 76.955 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.94050 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
53.100 1.290
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.270 1.270
  Rmerge - -
  Rmeas - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.037 0.892
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
101950 4949
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.70 0.40
Completeness [%]
_reflns.percent_possible_obs
99.5 -
Multiplicity
_reflns.pdbx_redundancy
13.4 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.270

Refinement
PDB entry ID
_entry.id
9R0Y
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2025-04-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
50.0 - 1.270 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1655 / 0.1912
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS