Data quality metrics extracted from 8qry.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8QRY at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU FR-E+ SUPERBRIGHT
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2021-08-17
Detector
_diffrn_detector.type
MAR scanner 345 mm plate
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
DIALS
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (1.17.1_3660: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
28.304 45.284 65.569 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.50000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
65.570 1.900
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.870 1.870
  Rmerge - -
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.124 0.434
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
7339 282
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
8.70 -
Completeness [%]
_reflns.percent_possible_obs
99.2 -
Multiplicity
_reflns.pdbx_redundancy
3.3 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.981 0.596

Refinement
PDB entry ID
_entry.id
8QRY
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-10-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
37.3 - 1.870 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2385 / 0.3017
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given