Data quality metrics extracted from 6qnd.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6QND at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
PETRA III, EMBL c/o DESY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
P14 (MX2)
Temperature [K]
_diffrn.ambient_temp
293
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-12-06
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9763
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.13_2998: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 2 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
95.02 99.56 87.65 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97630 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
20.055 2.070
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.000 2.000
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
28312 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
4.50 -
Completeness [%]
_reflns.percent_possible_obs
99.6 -
Multiplicity
_reflns.pdbx_redundancy
54.8 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
6QND
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-02-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.1 - 2.001 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1839 / 0.2192