Data quality metrics extracted from 8qmr.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8QMR at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE MASSIF-3
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MASSIF-3
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2023-05-18
Detector
_diffrn_detector.type
DECTRIS EIGER X 4M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9677
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.20.1_4487: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
91.52 115.62 179.64 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96770 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
38.070 38.070 2.360
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.300 10.290 2.300
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.154 0.051 0.998
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.164 0.055 1.063
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
85212 1051 6232
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.59 - -
Completeness [%]
_reflns.percent_possible_obs
99.9 - -
Multiplicity
_reflns.pdbx_redundancy
8.4 - -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.999 0.859

Refinement
PDB entry ID
_entry.id
8QMR
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-09-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
38.1 - 2.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1962 / 0.2278
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given