Data quality metrics extracted from 3qmb.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3QMB at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2010-06-16
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97904
Software
Data collection #1
_software.classification
EPICS-based (beamline control)
Data collection #2
_software.classification
data (acquisition systems)
Data reduction #1
_software.classification
DENZO (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data reduction #2
_software.classification
HKL-3000
Data scaling #1
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling #2
_software.classification
HKL-3000
Phasing #1
_software.classification
SHARP (Eric de La Fortelle; sharp-develop@globalphasing.com)
Phasing #2
_software.classification
DM (6.1; Kevin Cowtan; kowtan@ysbl.york.ac.uk)
Refinement
_software.classification
REFMAC (refmac_5.5.0109; 24/04/2001; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
37.375 71.965 115.600 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97904 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.120
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.050 4.420 2.050
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.058 0.033 0.506
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
10064 1087 982
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
13.90 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 99.2 99.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.5 7.9 8.2
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3QMB
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-02-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
30.6 - 2.060 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2204 / 0.2349
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD