Data quality metrics extracted from 6qim.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6QIM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE MASSIF-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MASSIF-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-04-03
Detector
_diffrn_detector.type
DECTRIS PILATUS 2M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9660
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
pointless
Phasing
_software.classification
PHASER (Phenix)
Refinement
_software.classification
PHENIX (1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 63 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
218.985 218.985 100.637 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96600 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
48.636 3.800
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.700 3.700
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
15438 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
12.00 -
Completeness [%]
_reflns.percent_possible_obs
98.2 -
Multiplicity
_reflns.pdbx_redundancy
14.2 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
6QIM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-01-21
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.6 - 3.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.3277 / 0.3561
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4JC6