Data quality metrics extracted from 6qhn.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6QHN at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-10-05
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97629
Software
Data reduction
_software.classification
XDS (Jun 1, 2017)
Data scaling
_software.classification
Aimless (0.5.32)
Phasing
_software.classification
PHASER (2.7.17)
Refinement
_software.classification
BUSTER (2.11.7)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
116.839 121.728 318.048 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97629 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.890 29.890 1.930
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.900 10.410 1.900
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.130 0.045 1.648
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.144 0.050 1.817
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.061 0.022 0.758
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
177084 1146 8606
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
8.70 28.00 1.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 95.6 98.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.6 4.8 5.7
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.997 0.997 0.392

Refinement
PDB entry ID
_entry.id
6QHN
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-01-17
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
27.7 - 1.900 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1800 / 0.2050
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4JZ6