Experiment | |
---|---|
Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | MAD SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | SYNCHROTRON The general class of the radiation source. |
Source details _diffrn_source.type | SSRL BEAMLINE BL9-2 The make, model or name of the source of radiation. |
Synchrotron site _diffrn_source.pdbx_synchrotron_site | SSRL Synchrotron site. |
Beamline _diffrn_source.pdbx_synchrotron_beamline | BL9-2 Synchrotron beamline. |
Temperature [K] _diffrn.ambient_temp | 100 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | CCD The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2009-11-06 The date of data collection. |
Detector _diffrn_detector.type | MARMOSAIC 325 mm CCD The make, model or name of the detector device used. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 0.91837,0.97954 Comma separated list of wavelengths or wavelength range. |
Software | |
Data reduction _software.classification | XDS The classification of the program according to its |
Data scaling _software.classification | XSCALE (January 30, 2009; Wolfgang Kabsch) The classification of the program according to its |
Phasing #1 _software.classification | SHELX (George M. Sheldrick; gsheldr@shelx.uni-ac.gwdg.de) The classification of the program according to its |
Phasing #2 _software.classification | SHARP (Eric de La Fortelle; sharp-develop@globalphasing.com) The classification of the program according to its |
Phasing #3 _software.classification | SHELXD The classification of the program according to its |
Model building _software.classification | MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu) The classification of the program according to its |
Refinement _software.classification | REFMAC (5.7.0032; Garib N. Murshudov; garib@ysbl.york.ac.uk) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | I 21 21 21 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 49.168 Unit-cell length a corresponding to the structure reported in 102.136 Unit-cell length b corresponding to the structure reported in 103.285 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 90.0 Unit-cell angle beta of the reported structure in degrees. 90.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 0.91837 The radiation wavelength in angstroms. 0.97954 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
---|---|---|---|
Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 28.202 The largest value in angstroms for the interplanar spacings | 28.200 The highest value in angstroms for the interplanar spacings | 1.860 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 1.800 The smallest value in angstroms for the interplanar spacings | 3.870 The smallest value in angstroms for the interplanar spacings | 1.800 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.056 The R value for merging intensities satisfying the observed | 0.021 The value of Rmerge(I) for reflections classified as 'observed' | 0.605 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas | - | - | - |
Rpim | - | - | - |
Total number of observations _reflns_shell.number_measured_obs | - | 8702 The number of reflections classified as 'observed' | 7837 The number of reflections classified as 'observed' |
Total number unique _reflns.number_obs _reflns_shell.number_unique_obs | 24327 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 4483 The total number of measured reflections classified as 'observed' | 4184 The total number of measured reflections classified as 'observed' |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs | 10.16 The mean of the ratio of the intensities to their | 31.40 The ratio of the mean of the intensities of the reflections | 1.50 The ratio of the mean of the intensities of the reflections |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 97.7 The percentage of geometrically possible reflections represented | 95.1 The percentage of geometrically possible reflections represented | 95.8 The percentage of geometrically possible reflections represented |
Multiplicity | - | - | - |
CC(1/2) | - | - | - |
Refinement | |
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PDB entry ID _entry.id | 4QGP |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2014-05-23 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 28.2 - 1.780 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.1935 / 0.2380 |
Structure solution method _refine.pdbx_method_to_determine_struct | MAD |