Data quality metrics extracted from 3qgm.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3QGM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2006-10-26
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792
Software
Data collection
_software.classification
SBC-Collect
Data reduction #1
_software.classification
DENZO (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data reduction #2
_software.classification
HKL-2000
Data scaling #1
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling #2
_software.classification
HKL-2000
Phasing #1
_software.classification
SHELXD
Phasing #2
_software.classification
MLPHARE
Phasing #3
_software.classification
DM
Phasing #4
_software.classification
SOLVE
Phasing #5
_software.classification
RESOLVE
Phasing #6
_software.classification
HKL-3000
Refinement
_software.classification
REFMAC (5.5.0109; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
54.252 68.843 70.154 74.99 87.33 85.76
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97920 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
37.200 50.000 2.030
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.000 5.430 2.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.090 0.074 0.522
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
62618 3258 2046
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
11.10 - 1.99
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.1 99.0 62.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.8 3.9 2.8
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3QGM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-01-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
37.2 - 2.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1692 / 0.2134
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD