Data quality metrics extracted from 5qd7.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5QD7 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X10SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X10SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2006-08-25
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Software
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
CNX
Refinement #1
_software.classification
PHENIX (1.12_2829)
Refinement #2
_software.classification
CNX
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
81.752 103.186 100.144 90.00 104.44 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97945 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
58.239
High resolution limit [Å]
_reflns.d_resolution_high
2.120
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.048
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
91075
  <I/σ(I)> -
Completeness [%]
_reflns.percent_possible_obs
99.8
  Multiplicity -
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5QD7
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-12-01
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
58.2 - 2.120 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1650 / 0.1880
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given