Data quality metrics extracted from 5qbc.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5QBC at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
BESSY BEAMLINE 14.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
BESSY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
14.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-12-18
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.918
Software
Data scaling
_software.classification
XSCALE (Wolfgang Kabsch)
Refinement
_software.classification
PHENIX (1.9_1692; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
45.267 73.203 52.916 90.00 109.39 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91800 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
42.700 42.700 1.540
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.450 4.330 1.450
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.074 0.027 0.672
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.086 0.032 0.781
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs
213818 8017 34263
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
57307 2219 9127
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
11.44 38.98 1.81
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.1 98.8 97.9
  Multiplicity - - -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.998 0.701

Refinement
PDB entry ID
_entry.id
5QBC
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-08-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
42.7 - 1.449 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1394 / 0.1682
Structure solution method
_refine.pdbx_method_to_determine_struct
Rigid Body