Data quality metrics extracted from 8qaa.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8QAA at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2021-12-16
Detector
_diffrn_detector.type
DECTRIS EIGER2 XE CdTe 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.98
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
DIALS
Phasing
_software.classification
Arcimboldo
Refinement
_software.classification
PHENIX (1.19.2_4158)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
29.274 89.496 32.667 90.00 115.21 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
44.750 1.657
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.600 1.600
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.118 0.818
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.129 0.888
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.049 0.344
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
19749 19709
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
8.63 1.11
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.3 96.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.0 6.6
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.997 0.783

Refinement
PDB entry ID
_entry.id
8QAA
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-08-22
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
44.8 - 1.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1806 / 0.2244
Structure solution method
_refine.pdbx_method_to_determine_struct
AB INITIO PHASING