Data quality metrics extracted from 6q25.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6Q25 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
ENRAF-NONIUS FR591
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2017-09-29
Detector
_diffrn_detector.type
APEX II CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5406
Software
Data reduction
_software.classification
PROTEUM PLUS
Data scaling
_software.classification
PROTEUM PLUS
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (dev_2906)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
39.063 39.063 101.522 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54060 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
17.409 1.961
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.893 1.893
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.191 0.532
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.211 0.658
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.087 0.380
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
4584 469
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.90 1.40
Completeness [%]
_reflns.percent_possible_obs
98.9 -
Multiplicity
_reflns.pdbx_redundancy
4.9 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.948 0.668

Refinement
PDB entry ID
_entry.id
6Q25
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-08-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
17.4 - 1.893 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1764 / 0.2279
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given