Data quality metrics extracted from 8px7.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8PX7 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I23
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I23
Temperature [K]
_diffrn.ambient_temp
80
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-10-12
Detector
_diffrn_detector.type
DECTRIS PILATUS 12M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
3.024
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
HKL2Map
Refinement
_software.classification
BUSTER (2.10.3)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
145.30 145.30 516.84 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
3.02400 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
28.940
High resolution limit [Å]
_reflns.d_resolution_high
3.400
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.160
Rmeas
_reflns.pdbx_Rrim_I_all
0.160
Rpim
_reflns.pdbx_Rpim_I_all
0.017
  Total number of observations -
Total number unique
_reflns.number_obs
29410
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
31.15
Completeness [%]
_reflns.percent_possible_obs
99.7
Multiplicity
_reflns.pdbx_redundancy
86.9
CC(1/2)
_reflns.pdbx_CC_half
1.000

Refinement
PDB entry ID
_entry.id
8PX7
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-07-22
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
28.9 - 3.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.3010 / 0.3100
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD