Data quality metrics extracted from 3pwd.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3PWD at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID13
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID13
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-02-20
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.033
Software
Data reduction
_software.classification
MOSFLM (3.3.16; 2010/01/06; Andrew G.W. Leslie; andrew@mrc-lmb.cam.ac.uk)
Data scaling
_software.classification
SCALA (3.3.16; 2010/01/06; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Refinement
_software.classification
PHENIX (1.6.4_486; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
142.41 60.96 45.66 90.00 100.19 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.03300 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
70.082 41.295 2.320
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.200 6.960 2.200
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.124 0.087 0.600
Rmeas
_reflns_shell.pdbx_Rrim_I_all
- 0.118 0.793
Rpim
_reflns_shell.pdbx_Rpim_I_all
- 0.079 0.512
Total number of observations
_reflns_shell.number_measured_all
- 972 4776
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
16400 473 2491
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
4.40 6.30 1.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
83.9 74.0 87.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.0 2.1 1.9
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3PWD
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-12-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
41.3 - 2.200 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1686 / 0.2297
Structure solution method
_refine.pdbx_method_to_determine_struct
Rigid body