Data quality metrics extracted from 4pvf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4PVF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
BESSY BEAMLINE 14.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
BESSY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
14.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-03-22
Detector
_diffrn_detector.type
PSI PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9798
Software
Data reduction
_software.classification
XDS
Data scaling #1
_software.classification
SCALA (0.1.29; 21/08/12; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Data scaling #2
_software.classification
XDS
Phasing
_software.classification
MOLREP (Alexei Vaguine; alexei@ysbl.york.ac.uk)
Refinement
_software.classification
REFMAC (5.8.0049; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 65 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
160.462 160.462 211.461 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97980 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
138.964
High resolution limit [Å]
_reflns.d_resolution_high
2.600
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
49990
  <I/σ(I)> -
Completeness [%]
_reflns.percent_possible_obs
100.0
Multiplicity
_reflns.pdbx_redundancy
15.4
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4PVF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-03-17
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
139.0 - 2.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2058 / 0.2435
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 3OU5