Data quality metrics extracted from 2pt6.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2PT6 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
MAX II BEAMLINE I911-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
MAX II
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I911-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2006-12-06
Detector
_diffrn_detector.type
MAR CCD 165 mm
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.043
Software
Data collection
_software.classification
MAR345dtb
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
REFMAC (5.2.0019; Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Refinement #2
_software.classification
REFMAC (5.2.0019; R. J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement #3
_software.classification
REFMAC (5.2.0019; Murshudov, G.N.; ccp4@dl.ac.uk)
Refinement #4
_software.classification
REFMAC (5.2.0019; April. 3, 2006; PDB; sw-help@rcsb.rutgers.edu)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
196.30 134.18 48.32 90.00 94.38 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.04300 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
20.000 2.051
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.000 2.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.720 0.269
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
80780 38389
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
13.67 5.25
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.1 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.2 3.2
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2PT6
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2007-05-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 2.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1805 / 0.2141
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2I7C