Data quality metrics extracted from 6pqn.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6PQN at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-E
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-E
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-03-08
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792, 0.9197, 1.4586, 1.1398, 1.0718, 1.0087
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
AutoSol
Model building
_software.classification
Coot (0.8.8)
Refinement #1
_software.classification
PHENIX (1.15.2_3472)
Refinement #2
_software.classification
PHENIX (1.15.2_3472)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
160.292 160.292 235.858 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979200.919701.458601.139801.071801.00870 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
200.000
High resolution limit [Å]
_reflns.d_resolution_high
3.010
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.086
Rmeas
_reflns.pdbx_Rrim_I_all
0.093
Rpim
_reflns.pdbx_Rpim_I_all
0.033
  Total number of observations -
Total number unique
_reflns.number_obs
35894
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
14.47
Completeness [%]
_reflns.percent_possible_obs
99.2
Multiplicity
_reflns.pdbx_redundancy
7.7
CC(1/2)
_reflns.pdbx_CC_half
0.999

Refinement
PDB entry ID
_entry.id
6PQN
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-07-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
80.2 - 3.010 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2193 / 0.2770
Structure solution method
_refine.pdbx_method_to_determine_struct
MIRAS