Data quality metrics extracted from 8poo.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8POO at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SOLEIL BEAMLINE PROXIMA 2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SOLEIL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
PROXIMA 2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-02-15
Detector
_diffrn_detector.type
DECTRIS EIGER X 9M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.98013
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
PHENIX (1.19.2_4158)
Refinement #2
_software.classification
PHENIX (1.19.2_4158)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
127.795 143.686 160.669 90.000 112.372 90.000
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98013 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
49.530
High resolution limit [Å]
_reflns.d_resolution_high
5.770
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.084
Rmeas
_reflns.pdbx_Rrim_I_all
0.091
Rpim
_reflns.pdbx_Rpim_I_all
0.035
  Total number of observations -
Total number unique
_reflns.number_obs
15151
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.60
Completeness [%]
_reflns.percent_possible_obs
98.6
Multiplicity
_reflns.pdbx_redundancy
6.9
CC(1/2)
_reflns.pdbx_CC_half
0.998

Refinement
PDB entry ID
_entry.id
8POO
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-07-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.0 - 5.770 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.4047 / 0.4256
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given