Data quality metrics extracted from 7pob.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7POB at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2021-05-05
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9796
Software
Data reduction
_software.classification
autoPROC
Data scaling #1
_software.classification
Aimless
Data scaling #2
_software.classification
pointless
Data scaling #3
_software.classification
xia2
Phasing
_software.classification
PHASER
Model building #1
_software.classification
Coot
Model building #2
_software.classification
BUCCANEER
Model building #3
_software.classification
MolProbity
Refinement #1
_software.classification
REFMAC (5.8.0267)
Refinement #2
_software.classification
REFMAC (5.8.0267)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
67.100 57.135 189.443 90.00 92.35 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97960 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
94.642 94.640 2.030
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.000 10.950 2.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.166 0.034 1.544
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.180 0.037 1.674
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.071 0.014 0.642
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
97294 653 4797
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
11.00 - -
Completeness [%]
_reflns.percent_possible_obs
99.9 - -
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
12.5 12.2 13.0
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 1.000 0.739

Refinement
PDB entry ID
_entry.id
7POB
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-09-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
94.6 - 2.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2114 / 0.2614
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3TQX