Experiment | |
---|---|
Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | SINGLE WAVELENGTH SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | SYNCHROTRON The general class of the radiation source. |
Source details _diffrn_source.type | CLSI BEAMLINE 08ID-1 The make, model or name of the source of radiation. |
Synchrotron site _diffrn_source.pdbx_synchrotron_site | CLSI Synchrotron site. |
Beamline _diffrn_source.pdbx_synchrotron_beamline | 08ID-1 Synchrotron beamline. |
Temperature [K] _diffrn.ambient_temp | 100 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | CCD The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2010-05-15 The date of data collection. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 0.9795 Comma separated list of wavelengths or wavelength range. |
Software | |
Data reduction _software.classification | DENZO (Zbyszek Otwinowski; hkl@hkl-xray.com) The classification of the program according to its |
Data scaling #1 _software.classification | SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com) The classification of the program according to its |
Data scaling #2 _software.classification | HKL-2000 The classification of the program according to its |
Phasing _software.classification | MOLREP The classification of the program according to its |
Refinement _software.classification | REFMAC (Garib N. Murshudov; garib@ysbl.york.ac.uk) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 1 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 59.692 Unit-cell length a corresponding to the structure reported in 82.561 Unit-cell length b corresponding to the structure reported in 92.856 Unit-cell length c corresponding to the structure reported in 77.91 Unit-cell angle alpha of the reported structure in degrees. 78.14 Unit-cell angle beta of the reported structure in degrees. 71.07 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 0.97950 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
---|---|---|---|
Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 41.520 The largest value in angstroms for the interplanar spacings | 50.000 The highest value in angstroms for the interplanar spacings | 2.040 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 1.970 The smallest value in angstroms for the interplanar spacings | 4.240 The smallest value in angstroms for the interplanar spacings | 1.970 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.126 The R value for merging intensities satisfying the observed | 0.054 The value of Rmerge(I) for reflections classified as 'observed' | 0.521 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas | - | - | - |
Rpim | - | - | - |
Total number of observations | - | - | - |
Total number unique _reflns.number_obs _reflns_shell.number_unique_all | 111975 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 11314 The total number of measured reflections which are symmetry- | 11048 The total number of measured reflections which are symmetry- |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI | 6.90 The mean of the ratio of the intensities to their | - | - |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 98.0 The percentage of geometrically possible reflections represented | 99.2 The percentage of geometrically possible reflections represented | 96.9 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 4.0 Overall redundancy for this data set. | 4.0 Redundancy for the current shell. | 3.9 Redundancy for the current shell. |
CC(1/2) | - | - | - |
Refinement | |
---|---|
PDB entry ID _entry.id | 3PNO |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2010-11-19 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 41.5 - 1.970 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.1870 / 0.2195 |
Structure solution method _refine.pdbx_method_to_determine_struct | MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | WARNING: no starting model (for MR) given |