Data quality metrics extracted from 2pnz.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2PNZ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
LNLS BEAMLINE D03B-MX1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
LNLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
D03B-MX1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2006-04-01
Detector
_diffrn_detector.type
MAR CCD 165 mm
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.427
Software
Data collection
_software.classification
MAR345dtb
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC (5.2.0019)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 3 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
93.81 93.81 126.26 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.42700 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
43.980 2.260
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.140 2.140
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.pdbx_Rsym_value
0.172 0.639
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
36060 5542
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
11.30 3.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.3 96.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
14.8 11.8
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2PNZ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2007-04-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.9 - 2.140 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1875 / 0.2548
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 2BA0