Data quality metrics extracted from 4plp.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4PLP at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
BESSY BEAMLINE 14.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
BESSY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
14.2
Temperature [K]
_diffrn.ambient_temp
90
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-05-12
Detector
_diffrn_detector.type
RAYONIX MX-225
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.918
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA (3.3.20)
Phasing
_software.classification
MOLREP
Model building
_software.classification
ARP
Refinement
_software.classification
PHENIX (phenix.refine: 1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
70.045 109.792 192.957 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91800 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
96.478 47.713 1.380
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.314 4.150 1.310
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.182 0.039 7.317
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.215 0.046 9.335
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.112 0.024 5.693
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
1068673 40233 54142
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
307932 11564 23267
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
4.50 14.80 0.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
87.5 98.6 45.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.5 3.5 2.3
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4PLP
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-05-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
10.0 - 1.490 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1906 / 0.2254
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2PH5