Data quality metrics extracted from 4pl7.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4PL7 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSRRC BEAMLINE BL13B1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSRRC
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL13B1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-12-11
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.000
Software
Data collection
_software.classification
DENZO
Data reduction
_software.classification
SCALEPACK
Phasing
_software.classification
PHASER (2.5.5)
Model building #1
_software.classification
Coot
Model building #2
_software.classification
PHASER
Refinement #1
_software.classification
PHENIX
Refinement #2
_software.classification
PHENIX (phenix.refine: 1.8.4_1496)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
56.508 139.495 56.485 90.00 116.21 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
20.000 20.000 2.280
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.200 4.720 2.200
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.109 0.080 0.373
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
132268 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
37614 3990 2847
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.5 99.1 71.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.5 3.7 2.8
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4PL7
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-05-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.8 - 2.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1950 / 0.2579
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1YAG, chain Å