Data quality metrics extracted from 3pkz.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3PKZ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 21-ID-F
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
21-ID-F
Temperature [K]
_diffrn.ambient_temp
73
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-12-19
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9787
Software
Data collection
_software.classification
HKL-3000
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
SOLVE
Refinement
_software.classification
REFMAC (5.5.0072)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 65
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
128.208 128.208 182.015 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979400.97870 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
100.000 1.860
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.800 1.830
Rmerge
_reflns_shell.Rmerge_I_obs
- 0.966
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
140384 7798
<I/σ(I)>
_reflns_shell.meanI_over_sigI_obs
- 1.79
Completeness [%]
_reflns.percent_possible_obs
90.0 -
Multiplicity
_reflns_shell.pdbx_redundancy
- 6.3
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
3PKZ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-11-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
42.0 - 1.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2069 / 0.2465
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD