Data quality metrics extracted from 1pk1.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1PK1 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.2
Temperature [K]
_diffrn.ambient_temp
128
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2002-02-01
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9700
Software
Data reduction
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
MLPHARE
Refinement
_software.classification
CNS (1.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
30.277 46.866 123.987 90.00 90.72 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979500.979700.972001.700000.97000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
20.000 1.860
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.800 1.800
Rmerge
_reflns.pdbx_Rsym_value
0.029 -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
28975 -
  <I/σ(I)> - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
89.6 76.8
  Multiplicity - -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
1PK1
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2003-06-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.6 - 1.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2330 / 0.2490
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD