Data quality metrics extracted from 4pid.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4PID at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X10SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X10SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2011-11-20
Detector
_diffrn_detector.type
PSI PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.000
Software
Data scaling
_software.classification
XSCALE (Jan 30, 2009)
Refinement
_software.classification
REFMAC (5.5.0102)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
112.783 112.783 50.347 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
97.700 97.700 1.630
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.590 7.110 1.590
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.063 0.029 0.542
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.066 0.030 0.571
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs
495405 6121 36696
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
49317 594 3630
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
22.95 62.86 4.28
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.8 100.0
Multiplicity
_reflns.pdbx_redundancy
10.0 - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4PID
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-05-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.8 - 1.590 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1648 / 0.1892
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB entry 1NLN