Data quality metrics extracted from 3pi5.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3PI5 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU FR-E SUPERBRIGHT
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-01-03
Detector
_diffrn_detector.type
RIGAKU SATURN 92
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54178
Software
Data reduction
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing
_software.classification
CNX
Refinement #1
_software.classification
CNS (Axel T. Brunger; axel.brunger@yale.edu)
Refinement #2
_software.classification
CNX
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
81.486 102.416 100.178 90.00 104.45 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54178 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.490
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 5.175 2.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.062 0.039 0.484
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
62750 6386 6194
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
17.30 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 99.3 99.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.9 7.3 5.3
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3PI5
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2010-11-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
40.2 - 2.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2170 / 0.2490
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS