Data quality metrics extracted from 2pij.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2PIJ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL9-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL9-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-07-21
Detector
_diffrn_detector.type
MARMOSAIC 325 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97935,0.97921,0.91165
Software
Data collection
_software.classification
Blu-Ice
Data reduction
_software.classification
CrystalClear
Data scaling #1
_software.classification
d*TREK (9.2SSI; Nov 2 2004; Pflugrath, J.W.; jwp@RigakuMSC.com)
Data scaling #2
_software.classification
CrystalClear
Phasing #1
_software.classification
SOLVE (2.09; 25-Apr-2005; Tom Terwilliger; terwilliger@LANL.gov)
Phasing #2
_software.classification
RESOLVE (2.09; 25-Apr-2005; Terwilliger, T. C; terwilliger@LANL.gov)
Refinement
_software.classification
REFMAC (Murshudov, G.N.; ccp4@dl.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 31 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
40.94 40.94 123.50 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979350.979210.91165 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
34.080 1.760
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.700 1.700
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.055 0.434
  Rmeas - -
  Rpim - -
Total number of observations
_reflns_shell.number_measured_all
- 5236
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
13741 1222
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
13.50 3.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.1 90.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.8 4.3
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2PIJ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2007-04-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
34.1 - 1.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2180 / 0.2710
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD