Data quality metrics extracted from 4ph8.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4PH8 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE BM14
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BM14
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-10-11
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.75
Software
Data reduction #1
_software.classification
XDS
Data reduction #2
_software.classification
XSCALE
Data scaling
_software.classification
SCALA (3.3.20)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0071)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
77.832 80.172 91.416 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.954001.75000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
91.416 47.656 1.630
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.550 4.900 1.550
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.038 0.016 0.787
Rmeas
_reflns.pdbx_Rrim_I_all
0.044 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.021 0.009 0.427
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
170118 5110 24737
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
40475 1351 5758
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
19.00 39.30 1.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.2 95.1 95.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.2 3.8 4.3
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4PH8
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-05-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
55.8 - 1.550 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1562 / 0.2319
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD