Data quality metrics extracted from 4pe7.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4PE7 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL7-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL7-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-04-25
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.1271
Software
Data collection
_software.classification
Blu-Ice
Data scaling #1
_software.classification
SCALA (3.3.20)
Data scaling #2
_software.classification
XDS
Data scaling #3
_software.classification
XSCALE
Refinement
_software.classification
PHENIX (phenix.refine: 1.8.1_1168)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
34.638 90.018 60.796 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.12710 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
32.327 32.327 1.740
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.652 5.230 1.652
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.045 0.018 0.613
Rmeas
_reflns.pdbx_Rrim_I_all
0.051 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.023 0.010 0.310
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
55035 1780 7875
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
11752 427 1673
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
22.70 22.40 1.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 99.7 99.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.7 4.2 4.7
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4PE7
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-04-22
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
32.3 - 1.652 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1727 / 0.2144