Data quality metrics extracted from 4pdj.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4PDJ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Method
_exptl.method
NEUTRON DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
LAUE
Source type
_diffrn_source.source
NUCLEAR REACTOR
Source details
_diffrn_source.type
OTHER
Temperature [K]
_diffrn.ambient_temp
291
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2013-08-10
Detector
_diffrn_detector.type
CUSTOM-MADE
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
3.3-4.5
Software
Data processing
_software.classification
HKL-3000
Data reduction #1
_software.classification
SCALA
Data reduction #2
_software.classification
LAUEGEN
Data scaling
_software.classification
SCALA
Phasing
_software.classification
PHASER
Model building #1
_software.classification
Coot
Model building #2
_software.classification
Coot
Refinement
_software.classification
PHENIX (phenix.refine: dev_1358)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
34.293 45.625 98.974 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.540003.300004.50000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 2.100 1.700
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.599 1.994 1.599
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.188 - 0.310
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
20751 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
5.30 - 3.20
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
79.3 - 61.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.5 - 5.8
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4PDJ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-04-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
32.4 - 1.994 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2303 / 0.2707
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1RX2