Data quality metrics extracted from 7pb3.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7PB3 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2018-09-09
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.91587
Software
Data reduction
_software.classification
xia2
Data scaling #1
_software.classification
STARANISO
Data scaling #2
_software.classification
DIALS
Phasing #1
_software.classification
MoRDa
Phasing #2
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0267)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
109.041 109.041 105.163 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91587 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
109.100
High resolution limit [Å]
_reflns.d_resolution_high
2.840
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.112
  Rmeas -
Rpim
_reflns.pdbx_Rpim_I_all
0.046
  Total number of observations -
Total number unique
_reflns.number_obs
9545
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
13.60
Completeness [%]
_reflns.percent_possible_obs
89.7
Multiplicity
_reflns.pdbx_redundancy
12.6
CC(1/2)
_reflns.pdbx_CC_half
0.999

Refinement
PDB entry ID
_entry.id
7PB3
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-07-30
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
77.2 - 2.841 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2513 / 0.3296
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6j7c