Data quality metrics extracted from 8p9a.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8P9A at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X06SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X06SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2021-08-18
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.20.14487)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
303.81 287.52 435.86 90.00 98.94 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
143.000
High resolution limit [Å]
_reflns.d_resolution_high
2.900
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.060
Rmeas
_reflns.pdbx_Rrim_I_all
0.090
Rpim
_reflns.pdbx_Rpim_I_all
0.060
  Total number of observations -
Total number unique
_reflns.number_obs
1616844
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
1.08
Completeness [%]
_reflns.percent_possible_obs
99.3
Multiplicity
_reflns.pdbx_redundancy
5.1
CC(1/2)
_reflns.pdbx_CC_half
0.970

Refinement
PDB entry ID
_entry.id
8P9A
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-06-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
143.0 - 2.900 Å
Rwork
_refine.ls_R_factor_R_work
0.2145
WARNING: no Rfree given (but Rwork)!?
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given