Data quality metrics extracted from 7p9k.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7P9K at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I24
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I24
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-12-08
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9781
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
DIALS
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
REFMAC (CCP4 Program Suite v7.1.015)
Refinement #2
_software.classification
PHENIX (1.14_3260)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
214.620 67.256 126.547 90.000 102.049 90.000
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97810 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
72.890 2.160
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.120 2.120
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.078 0.899
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
99627 4879
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
5.40 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.4 98.6
Multiplicity
_reflns.pdbx_redundancy
2.0 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.994 0.341

Refinement
PDB entry ID
_entry.id
7P9K
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-07-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
72.9 - 2.120 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2040 / 0.2515
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD